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Coiro, Mario; Martínez, Leandro C.A.; Upchurch, Garland R.; Doyle, James A.
doi: 10.1111/nph.16657pmid: 32400897
The pinnately lobed Aptian leaf fossil Mesodescolea plicata was originally described as a cycad, but new evidence from cuticle structure suggests that it is an angiosperm. Here we document the morphology and cuticle anatomy of Mesodescolea and explore its significance for early angiosperm evolution. We observed macrofossils and cuticles of Mesodescolea with light, scanning electron and transmission electron microscopy, and used phylogenetic methods to test its relationships among extant angiosperms. Mesodescolea has chloranthoid teeth and tertiary veins forming elongate areoles. Its cuticular morphology and ultrastructure reject cycadalean affinities, whereas its guard cell shape and stomatal ledges are angiospermous. It shares variable stomatal complexes and epidermal oil cells with angiosperm leaves from the lower Potomac Group. Phylogenetic analyses and hypothesis testing support its placement within the basal ANITA grade, most likely in Austrobaileyales, but it diverges markedly in leaf form and venation. Although many Early Cretaceous angiosperms fall within the morphological range of extant taxa, Mesodescolea reveals unexpected early morphological and ecophysiological trends. Its similarity to other Early Cretaceous lobate leaves, many identified previously as eudicots but in some cases pre‐dating the appearance of tricolpate pollen, may indicate that Mesodescolea is part of a larger extinct lineage of angiosperms.
Paillassa, Jennifer; Wright, Ian J.; Prentice, I. Colin; Pepin, Steeve; Smith, Nicholas G.; Ethier, Gilbert; Westerband, Andrea C.; Lamarque, Laurent J.; Wang, Han; Cornwell, Will K.; Maire, Vincent
doi: 10.1111/nph.16702pmid:
Girolomoni, Laura; Bellamoli, Francesco; Cruz Valbuena, Gabriel; Perozeni, Federico; D'Andrea, Cosimo; Cerullo, Giulio; Cazzaniga, Stefano; Ballottari, Matteo
doi: 10.1111/nph.16674pmid: 32442330
The xanthophyll cycle is the metabolic process by which the carotenoid violaxanthin is de‐epoxidated to zeaxanthin, a xanthophyll with a crucial photoprotective role in higher plants and mosses. The role of zeaxanthin is still unclear in green algae, and a peculiar violaxanthin de‐epoxidating enzyme was found in the model organism Chlamydomonas reinhardtii. Here, we investigated the molecular details and functions of the xanthophyll cycle in the case of Chlorella vulgaris, one of the green algae most considered for industrial cultivation, where resistance to high light stress is a prerequisite for sustainable biomass production. Identification of the violaxanthin de‐epoxidase enzyme in C. vulgaris was performed by genome mining and in vitro analysis of the catalytic activity of the gene product identified. The photoprotective role of zeaxanthin was then investigated in vivo and in isolated pigment‐binding complexes. The results obtained demonstrate the functioning, even though with a different pH sensitivity, of a plant‐like violaxanthin de‐epoxidase enzyme in C. vulgaris. Differently from C. reinhardtii, zeaxanthin accumulation in C. vulgaris was found to be crucial for photoprotective quenching of excitation energy harvested by both photosystem I and II. These findings demonstrate an evolutionary divergence of photoprotective mechanisms among Chlorophyta.
Chaudhary, V. Bala; Nolimal, Sarah; Sosa‐Hernández, Moisés A.; Egan, Cameron; Kastens, Jude
doi: 10.1111/nph.16667pmid: 32421866
Dispersal is a key process driving local‐scale community assembly and global‐scale biogeography of plant symbiotic arbuscular mycorrhizal (AM) fungal communities. A trait‐based approach could improve predictions regarding how AM fungal aerial dispersal varies by species. We conducted month‐long collections of aerial AM fungi for 12 consecutive months in an urban mesic environment at heights of 20 m. We measured morphological functional traits of collected spores and assessed aerial AM fungal community structure both morphologically and with high‐throughput sequencing. Large numbers of AM fungal spores were present in the air over the course of 1 yr, and these spores exhibited traits that facilitate aerial dispersal. Measured aerial spores were smaller than average for Glomeromycotinan fungi. Trait‐based predictions indicate that nearly one third of described species from diverse genera demonstrate the potential for aerial dispersal. Diversity of aerial AM fungi was relatively high (20 spore species and 17 virtual taxa), and both spore abundance and community structure shifted temporally. The prevalence of aerial dispersal in AM fungi is perhaps greater than previously indicated, and a hypothesized model of AM fungal aerial dispersal mechanisms is presented. Anthropogenic soil impacts may liberate AM fungal propagules initiating the dispersal of ruderal species.
Liu, Genzhong; Li, Changxing; Yu, Huiyang; Tao, Peiwen; Yuan, Lei; Ye, Jie; Chen, Weifang; Wang, Ying; Ge, Pingfei; Zhang, Junhong; Zhou, Guolin; Zheng, Wei; Ye, Zhibiao; Zhang, Yuyang
doi: 10.1111/nph.16705pmid: 32463946
Fruit development involves chloroplast development, carotenoid accumulation and fruit coloration. Although genetic regulation of fruit development has been extensively investigated, epigenetic regulation of fruit coloration remains largely unexplored. Here, we report a naturally occurring epigenetic regulation of TAGL1, and its impact on chloroplast development and fruit coloration. We used a genome‐wide association study in combination with map‐based cloning to identify the GREEN STRIPE (GS) locus, a methylated isoform of TAGL1 regulating diversified chloroplast development and carotenoid accumulation. Nonuniform pigmentation of fruit produced by GS was highly associated with methylation of the TAGL1 promoter, which is linked to a SNP at SL2.50ch07_63842838. High degrees of methylation of the TAGL1 promoter downregulated its expression, leading to green stripes. By contrast, low degrees of methylation led to light green stripes in gs. RNA‐seq and ChIP collectively showed that the expression of genes involved with Chl synthesis and chloroplast development were significantly upregulated in green stripes relative to light green stripes. Quantitative PCR and dual luciferase assay confirmed that TAGL1 downregulates expression of SlMPEC, SlPsbQ, and SlCAB, and upregulates expression of PSY1 – genes which are associated with chloroplast development and carotenoid accumulation. Altogether, our findings regarding the GS locus demonstrate that naturally occurring methylation of TAGL1 has diverse effects on plastid development in fruit.
Lindberg, Camilla Lorange; Hanslin, Hans Martin; Schubert, Marian; Marcussen, Thomas; Trevaskis, Ben; Preston, Jill Christine; Fjellheim, Siri
doi: 10.1111/nph.16666pmid: 32421861
Semelparous annual plants flower a single time during their 1‐yr life cycle, investing much of their energy into rapid reproduction. By contrast, iteroparous perennial plants flower multiple times over several years, and partition their resources between reproduction and persistence. To which extent evolutionary transitions between life‐cycle strategies are internally constrained at the developmental, genetic and phylogenetic level is unknown. Here we study the evolution of life‐cycle strategies in the grass subfamily Pooideae and test if transitions between them are facilitated by evolutionary precursors. We integrate ecological, life‐cycle strategy and growth data in a phylogenetic framework. We investigate if growth traits are candidates for a precursor. Species in certain Pooideae clades are predisposed to evolve annuality from perenniality, potentially due to the shared inheritance of specific evolutionary precursors. Seasonal dry climates, which have been linked to annuality, were only able to select for transitions to annuality when the precursor was present. Allocation of more resources to above‐ground rather than below‐ground growth is a candidate for the precursor. Our findings support the hypothesis that only certain lineages can respond quickly to changing external conditions by switching their life‐cycle strategy, likely due to the presence of evolutionary precursors.
doi: 10.1111/nph.16045pmid: 31276218
Most plant–microbe interactions are facultative, with microbes experiencing temporally and spatially variable selection. How this variation affects microbial evolution is poorly understood. Given its tractability and ecological and agricultural importance, the legume–rhizobia nitrogen‐fixing symbiosis is a powerful model for identifying traits and genes underlying bacterial fitness. New technologies allow high‐throughput measurement of the relative fitness of bacterial mutants, strains and species in mixed inocula in the host, rhizosphere and soil environments. I consider how host genetic variation (G × G), other environmental factors (G × E), and host life‐cycle variation may contribute to the maintenance of genetic variation and adaptive trajectories of rhizobia – and, potentially, other facultative symbionts. Lastly, I place these findings in the context of developing beneficial inoculants in a changing climate.
Oono, Ryoko; Black, Danielle; Slessarev, Eric; Sickler, Burton; Strom, Amanda; Apigo, Austen
doi: 10.1111/nph.16709pmid: 32472573
Foliar fungal endophytes are one of the most diverse guilds of symbiotic fungi found in the photosynthetic tissues of every plant lineage, but it is unclear how plant environments and leaf resource availability shape their diversity. We explored correlations between leaf nutrient availability and endophyte diversity among Pinus muricata and Vaccinium ovatum plants growing across a soil nutrient gradient spanning a series of coastal terraces in Mendocino, California. Endophyte richness decreased in plants with higher leaf nitrogen‐to‐phosphorus ratios for both host species, but increased with sodium, which may be toxic to fungi at high concentrations. Isolation frequency, a proxy of fungal biomass, was not significantly predicted by any of the same leaf constituents in the two plant species. We propose that stressed plants can exhibit both low foliar nutrients or high levels of toxic compounds, and that both of these stress responses predict endophyte species richness. Stressful conditions that limit growth of fungi may increase their diversity due to the suppression of otherwise dominating species. Differences between the host species in their endophyte communities may be explained by host specificity, leaf phenology, or microclimates.
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Photosynthetic ‘least‐cost’ theory posits that the optimal trait combination for a given environment is that where the summed costs of photosynthetic water and nutrient acquisition/use are minimised. The effects of soil water and nutrient availability on photosynthesis should be stronger as climate‐related costs for both resources increase. Two independent datasets of photosynthetic traits, Globamax (1509 species, 288 sites) and Glob13C (3645 species, 594 sites), were used to quantify biophysical and biochemical limitations of photosynthesis and the key variable Ci/Ca (CO2 drawdown during photosynthesis). Climate and soil variables were associated with both datasets. The biochemical photosynthetic capacity was higher on alkaline soils. This effect was strongest at more arid sites, where water unit‐costs are presumably higher. Higher values of soil silt and depth increased Ci/Ca, likely by providing greater H2O supply, alleviating biophysical photosynthetic limitation when soil water is scarce. Climate is important in controlling the optimal balance of H2O and N costs for photosynthesis, but soil properties change these costs, both directly and indirectly. In total, soil properties modify the climate‐demand driven predictions of Ci/Ca by up to 30% at a global scale.