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Subject:: Biochemistry
Publisher:: arXiv (Cornell University)
ISSN:: 1367-4803
Scimago Journal Rank:: 415

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1985

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journal article

Open Access Collection

heatmaply: an R package for creating interactive cluster heatmaps for online publishing

Galili, Tal;OCallaghan, Alan;Sidi, Jonathan;Sievert, Carson

2019 Statistics

doi: 10.1093/bioinformatics/btx657pmid: 29069305

Abstract: Summary: heatmaply is an R package for easily creating interactive cluster heatmaps that can be shared online as a stand-alone HTML file. Interactivity includes a tooltip display of values when hovering over cells, as well as the ability to zoom in to specific sections of the figure from the data matrix, the side dendrograms, or annotated labels. Thanks to the synergistic relationship between heatmaply and other R packages, the user is empowered by a refined control over the statistical and visual aspects of the heatmap layout. Availability and implementation: The heatmaply package is available under the GPL-2 Open Source license. It comes with a detailed vignette, and is freely available from: this http URL. Supplementary information: Supplementary data are available at Bioinformatics online.

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