TY - JOUR
AU - Li, Songgang
AB - Summary: NMPP package is a bundle of user-customized tools based on established algorithms and methods to process self-designed NimbleGen microarray data. It features a command-line-based integrative processing procedure that comprises five major functional components, namely the raw microarray data parsing and integrating module, the array spatial effect smoothing and visualization module, the probe-level multi-array normalization module, the gene expression intensity summarization module and the gene expression status inference module.Availability: Contact: Xiangfeng.Wang@Yale.eduSupplementary information: The supplementary materials, figures, testing dataset, software instructions and a typical workflow of using NMPP package are accessible through the above homepage.
TI - NMPP: a user-customized NimbleGen microarray data processing pipeline
JF - Bioinformatics
DO - 10.1093/bioinformatics/btl525
DA - 2006-10-12
UR - https://www.deepdyve.com/lp/oxford-university-press/nmpp-a-user-customized-nimblegen-microarray-data-processing-pipeline-Ms4a6DrDCB
SP - 2955
EP - 2957
VL - 22
IS - 23
DP - DeepDyve
ER -