TY - JOUR
AU - Song, Jun S
AB - Abstract ChIP-seq is a powerful method for obtaining genome-wide maps of protein-DNA interactions and epigenetic modifications. CHANCE (CHip-seq ANalytics and Confidence Estimation) is a standalone package for ChIP-seq quality control and protocol optimization. Our user-friendly graphical software quickly estimates the strength and quality of immunoprecipitations, identifies biases, compares the user's data with ENCODE's large collection of published datasets, performs multi-sample normalization, checks against quantitative PCR-validated control regions, and produces informative graphical reports. CHANCE is available at https://github.com/songlab/chance.
TI - CHANCE: comprehensive software for quality control and validation of ChIP-seq data
JF - Genome Biology
DO - 10.1186/gb-2012-13-10-r98
DA - 2012-10-01
UR - https://www.deepdyve.com/lp/springer-journals/chance-comprehensive-software-for-quality-control-and-validation-of-P5tItoOr70
SP - 1
EP - 15
VL - 13
IS - 10
DP - DeepDyve
ER -