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- Publisher
- Springer Journals
- Copyright
- Copyright © 2005 by Springer science + business media
- Subject
- Chemistry; Animal Anatomy / Morphology / Histology; Computer Applications in Chemistry ; Physical Chemistry
- ISSN
- 0920-654X
- eISSN
- 1573-4951
- DOI
- 10.1007/s10822-005-9001-7
- pmid
- 16331406
- Publisher site
- See Article on Publisher Site
Abstract
A series of bagged recursive partitioning models for log(BB) is presented. Using a LGO-CV, three sets of physical property descriptors are evaluated and found to have Q2 values of 0.51 (CPSA), 0.53 (Ro5x) and 0.53 (MOE). Extrapolating these models to Pfizer chemical space is difficult due to P-glycoprotein (P-gp) mediated efflux. Low correlation coefficients for this test set are improved (R 2=0.39) when compounds known to be P-gp substrates or statistical extrapolations are removed. The use of simple linear models for specific chemical series is also found to improve the correlation over a limited chemical space.
Journal
Journal of Computer-Aided Molecular Design – Springer Journals
Published: Dec 6, 2005